Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC77710.1 | SFD14551.1 | SAMN05216167_102382 | SAMN05216167_103493 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Peroxiredoxin. | 0.689 |
SFC77710.1 | SFF18917.1 | SAMN05216167_102382 | SAMN05216167_13420 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Peroxiredoxin. | 0.689 |
SFC77710.1 | SFF35778.1 | SAMN05216167_102382 | SAMN05216167_15313 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Peroxiredoxin. | 0.689 |
SFD14551.1 | SFC77710.1 | SAMN05216167_103493 | SAMN05216167_102382 | Peroxiredoxin. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.689 |
SFD14551.1 | SFD14582.1 | SAMN05216167_103493 | SAMN05216167_103495 | Peroxiredoxin. | Phytoene/squalene synthetase. | 0.550 |
SFD14551.1 | SFD14600.1 | SAMN05216167_103493 | SAMN05216167_103496 | Peroxiredoxin. | Phytoene desaturase. | 0.499 |
SFD14551.1 | SFF18917.1 | SAMN05216167_103493 | SAMN05216167_13420 | Peroxiredoxin. | Peroxiredoxin. | 0.428 |
SFD14551.1 | SFF35778.1 | SAMN05216167_103493 | SAMN05216167_15313 | Peroxiredoxin. | Peroxiredoxin. | 0.554 |
SFD14551.1 | gatB | SAMN05216167_103493 | SAMN05216167_103494 | Peroxiredoxin. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.840 |
SFD14551.1 | proC | SAMN05216167_103493 | SAMN05216167_103492 | Peroxiredoxin. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.573 |
SFD14582.1 | SFD14551.1 | SAMN05216167_103495 | SAMN05216167_103493 | Phytoene/squalene synthetase. | Peroxiredoxin. | 0.550 |
SFD14582.1 | SFD14600.1 | SAMN05216167_103495 | SAMN05216167_103496 | Phytoene/squalene synthetase. | Phytoene desaturase. | 0.999 |
SFD14582.1 | gatB | SAMN05216167_103495 | SAMN05216167_103494 | Phytoene/squalene synthetase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.564 |
SFD14600.1 | SFD14551.1 | SAMN05216167_103496 | SAMN05216167_103493 | Phytoene desaturase. | Peroxiredoxin. | 0.499 |
SFD14600.1 | SFD14582.1 | SAMN05216167_103496 | SAMN05216167_103495 | Phytoene desaturase. | Phytoene/squalene synthetase. | 0.999 |
SFD14600.1 | gatB | SAMN05216167_103496 | SAMN05216167_103494 | Phytoene desaturase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.506 |
SFF18917.1 | SFC77710.1 | SAMN05216167_13420 | SAMN05216167_102382 | Peroxiredoxin. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.689 |
SFF18917.1 | SFD14551.1 | SAMN05216167_13420 | SAMN05216167_103493 | Peroxiredoxin. | Peroxiredoxin. | 0.428 |
SFF35778.1 | SFC77710.1 | SAMN05216167_15313 | SAMN05216167_102382 | Peroxiredoxin. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.689 |
SFF35778.1 | SFD14551.1 | SAMN05216167_15313 | SAMN05216167_103493 | Peroxiredoxin. | Peroxiredoxin. | 0.554 |
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