STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE18760.1PAS domain S-box-containing protein. (437 aa)    
Predicted Functional Partners:
SFE18664.1
Circadian clock protein KaiC.
 
 
 
 0.923
SFC31455.1
PAS domain S-box-containing protein.
 
 
0.884
SFD13720.1
PAS domain S-box-containing protein.
 
 
0.884
SFE88892.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
0.881
SFF13722.1
PAS domain S-box-containing protein.
 
0.881
SFC88670.1
PAS domain-containing protein.
 
 0.865
SFF36533.1
Response regulator receiver domain-containing protein.
 
 
  0.865
SFE97502.1
Response regulator receiver domain-containing protein.
   
 0.864
SFE18732.1
Circadian clock protein KaiB.
 
     0.836
SFF37241.1
CheB methylesterase.
   
  0.836
Your Current Organism:
Spirosoma endophyticum
NCBI taxonomy Id: 662367
Other names: DSM 26130, Flexibacteraceae bacterium EX36, LMG 27272, LMG:27272, S. endophyticum, Spirosoma endophyticum Fries et al. 2013, strain EX36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.