STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF28736.1Initiator Replication protein. (398 aa)    
Predicted Functional Partners:
SFF35618.1
Protein involved in initiation of plasmid replication.
  
     0.774
SFF37790.1
Initiator Replication protein.
  
     0.771
SFF34680.1
Initiator Replication protein.
  
     0.770
SFF19587.1
Initiator Replication protein.
  
     0.769
SFE87352.1
Initiator Replication protein.
  
     0.768
SFF32273.1
Initiator Replication protein.
  
     0.766
SFF02390.1
Protein involved in initiation of plasmid replication.
  
     0.746
SFE55233.1
Toprim-like.
  
     0.703
SFD43649.1
Hypothetical protein.
  
     0.645
SFE88454.1
Transposase and inactivated derivatives, TnpA family.
  
     0.633
Your Current Organism:
Spirosoma endophyticum
NCBI taxonomy Id: 662367
Other names: DSM 26130, Flexibacteraceae bacterium EX36, LMG 27272, LMG:27272, S. endophyticum, Spirosoma endophyticum Fries et al. 2013, strain EX36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.