STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF31531.1TonB protein C-terminal. (136 aa)    
Predicted Functional Partners:
SFE01707.1
Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins.
 
 
 
 0.901
SFD80085.1
TonB-linked outer membrane protein, SusC/RagA family.
  
   0.880
SFF11249.1
TonB-linked outer membrane protein, SusC/RagA family.
  
   0.880
SFE63438.1
CarboxypepD_reg-like domain-containing protein.
 
 
 0.876
SFD83188.1
Outer membrane receptor proteins, mostly Fe transport.
  
   0.869
SFD87902.1
WD40-like Beta Propeller Repeat.
 
 
 
 0.763
SFD99929.1
Hypothetical protein.
  
     0.739
SFC77710.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.705
SFD06204.1
Outer membrane transport energization protein ExbB.
  
 
 0.703
SFD97591.1
WD40-like Beta Propeller Repeat.
 
 
 
 0.689
Your Current Organism:
Spirosoma endophyticum
NCBI taxonomy Id: 662367
Other names: DSM 26130, Flexibacteraceae bacterium EX36, LMG 27272, LMG:27272, S. endophyticum, Spirosoma endophyticum Fries et al. 2013, strain EX36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.