STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C440_00150Hypothetical protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component. (485 aa)    
Predicted Functional Partners:
C440_16219
Segregation and condensation protein A.
 
    0.590
C440_00850
COG1885 Uncharacterized protein conserved in archaea; Belongs to the UPF0212 family.
  
     0.555
dacZ
Hypothetical protein; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation.
 
   
 0.552
C440_00210
COG1885 Uncharacterized protein conserved in archaea.
  
     0.549
C440_01310
COG1745 Predicted metal-binding protein.
  
     0.486
C440_09372
COG0527 Aspartokinases; Belongs to the aspartokinase family.
       0.476
C440_00625
Hypothetical protein; COG4801 Predicted acyltransferase.
  
     0.473
C440_08712
Hypothetical protein.
  
     0.463
cofC
Hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
  
     0.462
C440_11568
Putative inositol-1(or 4)-monophosphatase / fructose-1,6-bisphosphatase; COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family.
  
  
  0.448
Your Current Organism:
Haloferax mucosum
NCBI taxonomy Id: 662479
Other names: H. mucosum ATCC BAA-1512, Haloferax mucosum ATCC BAA-1512, Haloferax mucosum JCM 14792, Haloferax mucosum PA12, Haloferax sp. PA12
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