Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
C440_00625 | C440_01005 | Hypothetical protein; COG4801 Predicted acyltransferase. | COG1287 Uncharacterized membrane protein, required for N-linked glycosylation. | 0.630 |
C440_00625 | C440_01010 | Hypothetical protein; COG4801 Predicted acyltransferase. | Putative polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | 0.492 |
C440_01000 | C440_01005 | COG2035 Predicted membrane protein. | COG1287 Uncharacterized membrane protein, required for N-linked glycosylation. | 0.601 |
C440_01000 | C440_01010 | COG2035 Predicted membrane protein. | Putative polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | 0.414 |
C440_01000 | C440_01015 | COG2035 Predicted membrane protein. | Hypothetical protein. | 0.414 |
C440_01005 | C440_00625 | COG1287 Uncharacterized membrane protein, required for N-linked glycosylation. | Hypothetical protein; COG4801 Predicted acyltransferase. | 0.630 |
C440_01005 | C440_01000 | COG1287 Uncharacterized membrane protein, required for N-linked glycosylation. | COG2035 Predicted membrane protein. | 0.601 |
C440_01005 | C440_01010 | COG1287 Uncharacterized membrane protein, required for N-linked glycosylation. | Putative polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | 0.669 |
C440_01005 | C440_01015 | COG1287 Uncharacterized membrane protein, required for N-linked glycosylation. | Hypothetical protein. | 0.584 |
C440_01005 | C440_01020 | COG1287 Uncharacterized membrane protein, required for N-linked glycosylation. | Hypothetical protein. | 0.401 |
C440_01005 | C440_02143 | COG1287 Uncharacterized membrane protein, required for N-linked glycosylation. | Gln-dependent amino transferase; COG0367 Asparagine synthase (glutamine-hydrolyzing). | 0.517 |
C440_01010 | C440_00625 | Putative polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | Hypothetical protein; COG4801 Predicted acyltransferase. | 0.492 |
C440_01010 | C440_01000 | Putative polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | COG2035 Predicted membrane protein. | 0.414 |
C440_01010 | C440_01005 | Putative polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | COG1287 Uncharacterized membrane protein, required for N-linked glycosylation. | 0.669 |
C440_01010 | C440_01015 | Putative polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | Hypothetical protein. | 0.774 |
C440_01010 | C440_01020 | Putative polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | Hypothetical protein. | 0.516 |
C440_01010 | C440_01030 | Putative polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | COG0438 Glycosyltransferase. | 0.511 |
C440_01010 | C440_02088 | Putative polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | COG0381 UDP-N-acetylglucosamine 2-epimerase. | 0.432 |
C440_01010 | C440_02143 | Putative polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | Gln-dependent amino transferase; COG0367 Asparagine synthase (glutamine-hydrolyzing). | 0.432 |
C440_01010 | C440_04588 | Putative polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. | COG0381 UDP-N-acetylglucosamine 2-epimerase. | 0.432 |
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