STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C440_01280Hypothetical protein; COG4745 Predicted membrane-bound mannosyltransferase. (547 aa)    
Predicted Functional Partners:
C440_16154
COG5427 Uncharacterized membrane protein.
 
     0.776
C440_03783
Hypothetical protein; COG1232 Protoporphyrinogen oxidase.
 
     0.694
C440_04353
Hypothetical protein.
  
     0.671
C440_16379
COG3356 Predicted membrane protein.
  
     0.632
C440_16144
GtrA-like family protein, cell surface polysaccharide biosynthesis protein; COG2246 Predicted membrane protein.
 
     0.614
C440_07682
Hypothetical protein.
  
     0.610
C440_00090
Membrane protein.
  
     0.607
C440_15654
dolichol-P-glucose synthetase; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.605
C440_01005
COG1287 Uncharacterized membrane protein, required for N-linked glycosylation.
 
     0.604
C440_02633
Hypothetical protein.
  
     0.569
Your Current Organism:
Haloferax mucosum
NCBI taxonomy Id: 662479
Other names: H. mucosum ATCC BAA-1512, Haloferax mucosum ATCC BAA-1512, Haloferax mucosum JCM 14792, Haloferax mucosum PA12, Haloferax sp. PA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.