Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C440_02413Carbohydrate ABC transporter ATP-binding protein, cut1 family; COG3839 ABC-type sugar transport systems, ATPase components. (379 aa)    
Predicted Functional Partners:
C440_02423
COG1175 ABC-type sugar transport systems, permease components.
 
  
  0.969
C440_02418
COG0395 ABC-type sugar transport system, permease component.
 
  
  0.961
C440_16714
COG1175 ABC-type sugar transport systems, permease components.
 
  
  0.922
C440_16719
COG0395 ABC-type sugar transport system, permease component.
 
  
 0.916
C440_10883
Sugar ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components.
  
  
 
0.909
C440_16709
COG2182 Maltose-binding periplasmic proteins/domains.
    
  0.907
C440_02428
Extracellular solute-binding protein family 1; COG1653 ABC-type sugar transport system, periplasmic component.
    
  0.905
C440_16704
Sugar ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components.
  
  
 
0.846
C440_06397
COG0395 ABC-type sugar transport system, permease component.
 
  
  0.736
C440_06392
COG1175 ABC-type sugar transport systems, permease components.
 
  
  0.716
Your Current Organism:
Haloferax mucosum
NCBI taxonomy Id: 662479
Other names: H. mucosum ATCC BAA-1512, Haloferax mucosum ATCC BAA-1512, Haloferax mucosum JCM 14792, Haloferax mucosum PA12, Haloferax sp. PA12
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