STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C440_02438Halocyanin hcpA; COG3794 Plastocyanin. (282 aa)    
Predicted Functional Partners:
C440_15419
Menaquinol--cytochrome-c reductase (cytochrome bc complex) cytochrome b/c subunit; COG1290 Cytochrome b subunit of the bc complex.
 
 
   0.746
C440_00415
Cox-type terminal oxidase subunit I/III; COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.729
C440_15609
COG1290 Cytochrome b subunit of the bc complex.
 
 
   0.717
C440_00110
Hypothetical protein.
  
     0.597
C440_01180
Light and oxygen sensing histidine kinase; COG2202 FOG: PAS/PAC domain.
  
     0.584
C440_15004
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
  0.579
C440_00090
Membrane protein.
  
     0.544
C440_00475
Hypothetical protein.
  
     0.508
C440_11558
Hypothetical protein.
  
     0.504
C440_16976
Hypothetical protein; COG1266 Predicted metal-dependent membrane protease.
  
     0.504
Your Current Organism:
Haloferax mucosum
NCBI taxonomy Id: 662479
Other names: H. mucosum ATCC BAA-1512, Haloferax mucosum ATCC BAA-1512, Haloferax mucosum JCM 14792, Haloferax mucosum PA12, Haloferax sp. PA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.