Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
C440_04918 | C440_04923 | Twin-arginine translocation protein, TatA/E family subunit; COG1826 Sec-independent protein secretion pathway components. | Hypothetical protein. | 0.623 |
C440_04918 | C440_04928 | Twin-arginine translocation protein, TatA/E family subunit; COG1826 Sec-independent protein secretion pathway components. | Hypothetical protein; COG0178 Excinuclease ATPase subunit. | 0.423 |
C440_04918 | C440_04933 | Twin-arginine translocation protein, TatA/E family subunit; COG1826 Sec-independent protein secretion pathway components. | Hypothetical protein. | 0.423 |
C440_04918 | C440_04938 | Twin-arginine translocation protein, TatA/E family subunit; COG1826 Sec-independent protein secretion pathway components. | Hypothetical protein; COG2202 FOG: PAS/PAC domain. | 0.423 |
C440_04918 | C440_04943 | Twin-arginine translocation protein, TatA/E family subunit; COG1826 Sec-independent protein secretion pathway components. | Hypothetical protein. | 0.423 |
C440_04923 | C440_04918 | Hypothetical protein. | Twin-arginine translocation protein, TatA/E family subunit; COG1826 Sec-independent protein secretion pathway components. | 0.623 |
C440_04923 | C440_04928 | Hypothetical protein. | Hypothetical protein; COG0178 Excinuclease ATPase subunit. | 0.512 |
C440_04923 | C440_04933 | Hypothetical protein. | Hypothetical protein. | 0.512 |
C440_04923 | C440_04938 | Hypothetical protein. | Hypothetical protein; COG2202 FOG: PAS/PAC domain. | 0.512 |
C440_04923 | C440_04943 | Hypothetical protein. | Hypothetical protein. | 0.512 |
C440_04923 | C440_04948 | Hypothetical protein. | Hypothetical protein. | 0.422 |
C440_04928 | C440_04918 | Hypothetical protein; COG0178 Excinuclease ATPase subunit. | Twin-arginine translocation protein, TatA/E family subunit; COG1826 Sec-independent protein secretion pathway components. | 0.423 |
C440_04928 | C440_04923 | Hypothetical protein; COG0178 Excinuclease ATPase subunit. | Hypothetical protein. | 0.512 |
C440_04928 | C440_04933 | Hypothetical protein; COG0178 Excinuclease ATPase subunit. | Hypothetical protein. | 0.773 |
C440_04928 | C440_04938 | Hypothetical protein; COG0178 Excinuclease ATPase subunit. | Hypothetical protein; COG2202 FOG: PAS/PAC domain. | 0.773 |
C440_04928 | C440_04943 | Hypothetical protein; COG0178 Excinuclease ATPase subunit. | Hypothetical protein. | 0.773 |
C440_04928 | C440_04948 | Hypothetical protein; COG0178 Excinuclease ATPase subunit. | Hypothetical protein. | 0.620 |
C440_04928 | C440_04953 | Hypothetical protein; COG0178 Excinuclease ATPase subunit. | Hypothetical protein. | 0.556 |
C440_04933 | C440_04918 | Hypothetical protein. | Twin-arginine translocation protein, TatA/E family subunit; COG1826 Sec-independent protein secretion pathway components. | 0.423 |
C440_04933 | C440_04923 | Hypothetical protein. | Hypothetical protein. | 0.512 |
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