STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C440_06442COG1175 ABC-type sugar transport systems, permease components. (297 aa)    
Predicted Functional Partners:
C440_06447
COG0395 ABC-type sugar transport system, permease component.
 
 0.990
C440_06437
Glycerol-3-phosphate ABC transporter periplasmic substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
 0.981
C440_16719
COG0395 ABC-type sugar transport system, permease component.
 0.972
C440_02328
COG0395 ABC-type sugar transport system, permease component.
 0.940
C440_04488
Glycerol-3-phosphate ABC transporter periplasmic substrate-binding protein; COG0840 Methyl-accepting chemotaxis protein.
 
 0.939
C440_16709
COG2182 Maltose-binding periplasmic proteins/domains.
 
 0.937
C440_06392
COG1175 ABC-type sugar transport systems, permease components.
  
  
 
0.922
C440_06397
COG0395 ABC-type sugar transport system, permease component.
 0.920
C440_06452
Glycerol-3-phosphate ABC-type transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components.
 
  
 0.920
C440_10888
COG0395 ABC-type sugar transport system, permease component.
 0.916
Your Current Organism:
Haloferax mucosum
NCBI taxonomy Id: 662479
Other names: H. mucosum ATCC BAA-1512, Haloferax mucosum ATCC BAA-1512, Haloferax mucosum JCM 14792, Haloferax mucosum PA12, Haloferax sp. PA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.