STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C440_11398COG1253 Hemolysins and related proteins containing CBS domains. (172 aa)    
Predicted Functional Partners:
C440_11403
Hypothetical protein.
       0.541
C440_11393
GNAT family acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.527
C440_14799
NADH dehydrogenase, subunit CD (ubiquinone); COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
       0.446
C440_14874
COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
       0.446
C440_14264
Bifunctional purine biosynthesis protein PurH; COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN.
 
  
  0.440
guaAB
GMP synthase subunit B; Catalyzes the synthesis of GMP from XMP.
  
 
 0.417
Your Current Organism:
Haloferax mucosum
NCBI taxonomy Id: 662479
Other names: H. mucosum ATCC BAA-1512, Haloferax mucosum ATCC BAA-1512, Haloferax mucosum JCM 14792, Haloferax mucosum PA12, Haloferax sp. PA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.