STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C440_11723Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG. (211 aa)    
Predicted Functional Partners:
C440_16499
Type II secretion system, transmembrane protein TadC.
  
     0.690
C440_15564
COG2214 DnaJ-class molecular chaperone.
  
     0.611
C440_11718
Hypothetical protein.
      
0.582
C440_12404
COG2510 Predicted membrane protein.
  
     0.549
C440_00090
Membrane protein.
  
     0.523
C440_15404
Halocyanin precursor-like protein; COG3794 Plastocyanin.
  
     0.522
C440_15504
Halocyanin precursor-like protein; COG3794 Plastocyanin.
  
     0.517
C440_15179
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.507
C440_00075
COG3387 Glucoamylase and related glycosyl hydrolases.
  
     0.506
C440_15169
COG3420 Nitrous oxidase accessory protein.
  
     0.500
Your Current Organism:
Haloferax mucosum
NCBI taxonomy Id: 662479
Other names: H. mucosum ATCC BAA-1512, Haloferax mucosum ATCC BAA-1512, Haloferax mucosum JCM 14792, Haloferax mucosum PA12, Haloferax sp. PA12
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.