STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C440_13699COG1960 Acyl-CoA dehydrogenases. (380 aa)    
Predicted Functional Partners:
C440_14799
NADH dehydrogenase, subunit CD (ubiquinone); COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 0.935
C440_14874
COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 0.935
C440_07837
COG2025 Electron transfer flavoprotein, alpha subunit.
 
 0.908
C440_11063
COG2025 Electron transfer flavoprotein, alpha subunit.
 
 
 0.831
C440_01460
COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.823
C440_11493
COG1250 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.812
C440_11058
COG2086 Electron transfer flavoprotein, beta subunit.
 
 
 0.803
C440_09687
Branched-chain alpha-keto acid dehydrogenase subunit E2; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
   
 0.788
C440_07832
COG2086 Electron transfer flavoprotein, beta subunit.
 
 
 0.787
C440_12264
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.771
Your Current Organism:
Haloferax mucosum
NCBI taxonomy Id: 662479
Other names: H. mucosum ATCC BAA-1512, Haloferax mucosum ATCC BAA-1512, Haloferax mucosum JCM 14792, Haloferax mucosum PA12, Haloferax sp. PA12
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.