STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C440_14434TRK potassium uptake system protein TrkH; COG0168 Trk-type K+ transport systems, membrane components. (534 aa)    
Predicted Functional Partners:
C440_12069
Potassium transport protein kefC; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
 
 
 0.982
C440_04148
TrkA domain-containing protein; COG0569 K+ transport systems, NAD-binding component.
 
 
 0.926
C440_14444
Trk potassium uptake system protein; COG0569 K+ transport systems, NAD-binding component; overlaps another CDS with the same product name.
 
 
 0.926
C440_12189
TRK potassium uptake system protein; COG0569 K+ transport systems, NAD-binding component.
 
 
 0.914
trkA
Potassium transporter peripheral membrane component; COG0569 K+ transport systems, NAD-binding component.
 
   
 0.896
C440_14374
NADH dehydrogenase (quinone); COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
     
 0.583
C440_07142
Phosphate ABC transporter substrate-binding protein; COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
      
 0.529
C440_08792
Divalent cation transporter, subunit II, MgtE family protein; COG1824 Permease, similar to cation transporters.
      
 0.529
C440_14799
NADH dehydrogenase, subunit CD (ubiquinone); COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
     
 0.485
C440_14874
COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
     
 0.485
Your Current Organism:
Haloferax mucosum
NCBI taxonomy Id: 662479
Other names: H. mucosum ATCC BAA-1512, Haloferax mucosum ATCC BAA-1512, Haloferax mucosum JCM 14792, Haloferax mucosum PA12, Haloferax sp. PA12
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