STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C440_14804COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; Belongs to the complex I 20 kDa subunit family. (233 aa)    
Predicted Functional Partners:
C440_00415
Cox-type terminal oxidase subunit I/III; COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
   
 
 0.999
C440_14374
NADH dehydrogenase (quinone); COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
 
 0.999
C440_14759
COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N).
 
 0.999
C440_14764
COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M).
 
 0.999
C440_14769
COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
 
 0.999
C440_14774
COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K).
 
 0.999
C440_14784
COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J).
  
 0.999
C440_14789
COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I).
 
 0.999
C440_14794
COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H).
 
 0.999
C440_14799
NADH dehydrogenase, subunit CD (ubiquinone); COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
 0.999
Your Current Organism:
Haloferax mucosum
NCBI taxonomy Id: 662479
Other names: H. mucosum ATCC BAA-1512, Haloferax mucosum ATCC BAA-1512, Haloferax mucosum JCM 14792, Haloferax mucosum PA12, Haloferax sp. PA12
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