STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C440_15089COG4083 Predicted membrane protein. (310 aa)    
Predicted Functional Partners:
C440_01005
COG1287 Uncharacterized membrane protein, required for N-linked glycosylation.
  
   
 0.841
asd
Phosphatidylserine decarboxylase; Catalyzes the formation of archaetidylethanolamine (PtdEtn) from archaetidylserine (PtdSer); Belongs to the phosphatidylserine decarboxylase family. PSD-A subfamily.
 
   
 0.829
C440_09522
COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases.
 
   
 0.799
C440_09147
Sodium/protn antiporter putative; COG0475 Kef-type K+ transport systems, membrane components.
   
    0.778
C440_10473
COG0681 Signal peptidase I.
  
   
 0.744
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.729
C440_14029
Hypothetical protein.
  
     0.727
C440_03408
COG4749 Uncharacterized protein conserved in archaea.
  
     0.723
C440_07892
Replication factor A; COG1599 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins.
  
     0.722
C440_09392
COG0681 Signal peptidase I.
  
   
 0.721
Your Current Organism:
Haloferax mucosum
NCBI taxonomy Id: 662479
Other names: H. mucosum ATCC BAA-1512, Haloferax mucosum ATCC BAA-1512, Haloferax mucosum JCM 14792, Haloferax mucosum PA12, Haloferax sp. PA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.