Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
C440_03863 | C440_15399 | Hypothetical protein. | Hypothetical protein. | 0.738 |
C440_15394 | C440_15399 | Hypothetical protein. | Hypothetical protein. | 0.543 |
C440_15394 | C440_15409 | Hypothetical protein. | Hypothetical protein. | 0.431 |
C440_15394 | C440_15414 | Hypothetical protein. | COG1290 Cytochrome b subunit of the bc complex. | 0.431 |
C440_15394 | C440_15419 | Hypothetical protein. | Menaquinol--cytochrome-c reductase (cytochrome bc complex) cytochrome b/c subunit; COG1290 Cytochrome b subunit of the bc complex. | 0.404 |
C440_15399 | C440_03863 | Hypothetical protein. | Hypothetical protein. | 0.738 |
C440_15399 | C440_15394 | Hypothetical protein. | Hypothetical protein. | 0.543 |
C440_15399 | C440_15404 | Hypothetical protein. | Halocyanin precursor-like protein; COG3794 Plastocyanin. | 0.564 |
C440_15399 | C440_15409 | Hypothetical protein. | Hypothetical protein. | 0.605 |
C440_15399 | C440_15414 | Hypothetical protein. | COG1290 Cytochrome b subunit of the bc complex. | 0.605 |
C440_15399 | C440_15419 | Hypothetical protein. | Menaquinol--cytochrome-c reductase (cytochrome bc complex) cytochrome b/c subunit; COG1290 Cytochrome b subunit of the bc complex. | 0.579 |
C440_15399 | C440_15424 | Hypothetical protein. | Hypothetical protein. | 0.514 |
C440_15399 | C440_15429 | Hypothetical protein. | Hypothetical protein. | 0.514 |
C440_15404 | C440_15399 | Halocyanin precursor-like protein; COG3794 Plastocyanin. | Hypothetical protein. | 0.564 |
C440_15404 | C440_15409 | Halocyanin precursor-like protein; COG3794 Plastocyanin. | Hypothetical protein. | 0.797 |
C440_15404 | C440_15414 | Halocyanin precursor-like protein; COG3794 Plastocyanin. | COG1290 Cytochrome b subunit of the bc complex. | 0.851 |
C440_15404 | C440_15419 | Halocyanin precursor-like protein; COG3794 Plastocyanin. | Menaquinol--cytochrome-c reductase (cytochrome bc complex) cytochrome b/c subunit; COG1290 Cytochrome b subunit of the bc complex. | 0.916 |
C440_15404 | C440_15424 | Halocyanin precursor-like protein; COG3794 Plastocyanin. | Hypothetical protein. | 0.646 |
C440_15404 | C440_15429 | Halocyanin precursor-like protein; COG3794 Plastocyanin. | Hypothetical protein. | 0.646 |
C440_15409 | C440_15394 | Hypothetical protein. | Hypothetical protein. | 0.431 |
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