STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C440_15744COG0350 Methylated DNA-protein cysteine methyltransferase. (151 aa)    
Predicted Functional Partners:
C440_07297
COG0210 Superfamily I DNA and RNA helicases.
  
   
 0.718
C440_08927
COG1199 Rad3-related DNA helicases.
 
   
 0.693
C440_12624
COG2404 Predicted phosphohydrolase (DHH superfamily).
  
     0.689
C440_00685
Hypothetical protein.
  
     0.663
C440_11558
Hypothetical protein.
  
     0.658
C440_11468
Succinate dehydrogenase subunit D.
  
     0.635
C440_09722
DNA topoisomerase I; COG0551 Zn-finger domain associated with topoisomerase type I.
  
     0.632
C440_10208
50S ribosomal protein L32e; COG0468 RecA/RadA recombinase.
 
   
 0.631
C440_14604
PBS lyase HEAT-like repeat protein; COG1413 FOG: HEAT repeat.
  
     0.619
C440_00720
Hypothetical protein; COG0662 Mannose-6-phosphate isomerase.
  
     0.608
Your Current Organism:
Haloferax mucosum
NCBI taxonomy Id: 662479
Other names: H. mucosum ATCC BAA-1512, Haloferax mucosum ATCC BAA-1512, Haloferax mucosum JCM 14792, Haloferax mucosum PA12, Haloferax sp. PA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.