STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C440_16494Type II/IV secretion system protein, ATP binding protein; COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis. (807 aa)    
Predicted Functional Partners:
C440_16499
Type II secretion system, transmembrane protein TadC.
 
   
 0.943
C440_16504
Hypothetical protein.
     
 0.848
C440_16509
Hypothetical protein.
       0.807
C440_16514
Hypothetical protein.
       0.807
C440_16519
Hypothetical protein.
       0.807
C440_16524
Hypothetical protein.
       0.807
C440_15934
Type II/IV secretion system proteins VirB11/TadA (ATPase); COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis.
  
   
 0.711
C440_13609
COG1955 Archaeal flagella assembly protein J.
 
  
 0.694
C440_14544
Archaeal flagella assembly protein J; COG2064 Flp pilus assembly protein TadC.
 
  
 0.687
C440_13619
Flagella-related protein H; COG2874 Predicted ATPases involved in biogenesis of archaeal flagella.
 
  
 0.648
Your Current Organism:
Haloferax mucosum
NCBI taxonomy Id: 662479
Other names: H. mucosum ATCC BAA-1512, Haloferax mucosum ATCC BAA-1512, Haloferax mucosum JCM 14792, Haloferax mucosum PA12, Haloferax sp. PA12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.