Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRES_1438 | CRES_1441 | CRES_1438 | CRES_1441 | Hypothetical protein. | Uncharacterized protein conserved in bacteria. | 0.420 |
CRES_1438 | CRES_1442 | CRES_1438 | CRES_1442 | Hypothetical protein. | Putative membrane protein. | 0.502 |
CRES_1438 | helZ | CRES_1438 | CRES_1439 | Hypothetical protein. | Superfamily II DNA/RNA helicases, SNF2 family. | 0.960 |
CRES_1438 | putP | CRES_1438 | CRES_1440 | Hypothetical protein. | Sodium/proline symporter family protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.658 |
CRES_1441 | CRES_1438 | CRES_1441 | CRES_1438 | Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.420 |
CRES_1441 | CRES_1442 | CRES_1441 | CRES_1442 | Uncharacterized protein conserved in bacteria. | Putative membrane protein. | 0.607 |
CRES_1441 | helZ | CRES_1441 | CRES_1439 | Uncharacterized protein conserved in bacteria. | Superfamily II DNA/RNA helicases, SNF2 family. | 0.424 |
CRES_1441 | putP | CRES_1441 | CRES_1440 | Uncharacterized protein conserved in bacteria. | Sodium/proline symporter family protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.611 |
CRES_1442 | CRES_1438 | CRES_1442 | CRES_1438 | Putative membrane protein. | Hypothetical protein. | 0.502 |
CRES_1442 | CRES_1441 | CRES_1442 | CRES_1441 | Putative membrane protein. | Uncharacterized protein conserved in bacteria. | 0.607 |
CRES_1442 | helZ | CRES_1442 | CRES_1439 | Putative membrane protein. | Superfamily II DNA/RNA helicases, SNF2 family. | 0.502 |
CRES_1442 | putP | CRES_1442 | CRES_1440 | Putative membrane protein. | Sodium/proline symporter family protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.566 |
CRES_2159 | putP | CRES_2159 | CRES_1440 | Putative membrane protein; Permeases of the major facilitator superfamily. | Sodium/proline symporter family protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.648 |
apt | putP | CRES_1130 | CRES_1440 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Sodium/proline symporter family protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.685 |
apt | whcA | CRES_1130 | CRES_2032 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | WhiB family transcription regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.669 |
gluA | putP | CRES_1205 | CRES_1440 | ABC-type polar amino acid transport system, ATPase component. | Sodium/proline symporter family protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.703 |
helZ | CRES_1438 | CRES_1439 | CRES_1438 | Superfamily II DNA/RNA helicases, SNF2 family. | Hypothetical protein. | 0.960 |
helZ | CRES_1441 | CRES_1439 | CRES_1441 | Superfamily II DNA/RNA helicases, SNF2 family. | Uncharacterized protein conserved in bacteria. | 0.424 |
helZ | CRES_1442 | CRES_1439 | CRES_1442 | Superfamily II DNA/RNA helicases, SNF2 family. | Putative membrane protein. | 0.502 |
helZ | putP | CRES_1439 | CRES_1440 | Superfamily II DNA/RNA helicases, SNF2 family. | Sodium/proline symporter family protein; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.686 |
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