Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANP64039.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)    
Predicted Functional Partners:
fldA_2
Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.
 
     0.832
seqA
Replication initiation regulator SeqA; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.
 
     0.796
ANP63546.1
TIGR03899 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
ANP64347.1
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
ANP66311.1
Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.767
ANP65395.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.760
ANP64162.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.759
ANP65074.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
ANP64741.1
Molybdopterin-guanine dinucleotide biosynthesis protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.750
podJ
Flagellar protein MotX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
Your Current Organism:
Vibrio alginolyticus
NCBI taxonomy Id: 663
Other names: ATCC 17749, Beneckea alginolytica, CAIM 516, CCUG 13445, CCUG 16315, CCUG 4989, CIP 103336, CIP 75.3, DSM 2171, IFO 15630, LMG 4409, LMG:4409, NBRC 15630, NCCB 71013, NCCB 77003, NCTC 12160, Oceanomonas alginolytica, Pseudomonas creosotensis, V. alginolyticus, Vibrio sp. PeIg0901
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