STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP66444.1Citrate:sodium symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)    
Predicted Functional Partners:
ANP66445.1
[citrate (pro-3S)-lyase] ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.840
ANP64316.1
Citrate lyase acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.840
ANP64318.1
holo-ACP synthase CitX; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.821
ANP64317.1
Citrate (pro-3S)-lyase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.818
ANP66446.1
Citrate lyase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.811
ANP64312.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.784
ANP64319.1
triphosphoribosyl-dephospho-CoA synthase CitG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.773
ANP64314.1
Oxaloacetate decarboxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.724
ANP64313.1
Oxaloacetate decarboxylase subunit beta; Catalyzes the formation of pyruvate from oxaloacetate; sodium translocating; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.673
dpiA
Two-component response regulator DpiA; Regulates the expression of citrate fermentation genes; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.649
Your Current Organism:
Vibrio alginolyticus
NCBI taxonomy Id: 663
Other names: ATCC 17749, Beneckea alginolytica, CAIM 516, CCUG 13445, CCUG 16315, CCUG 4989, CIP 103336, CIP 75.3, DSM 2171, IFO 15630, LMG 4409, LMG:4409, NBRC 15630, NCCB 71013, NCCB 77003, NCTC 12160, Oceanomonas alginolytica, Pseudomonas creosotensis, V. alginolyticus, Vibrio sp. PeIg0901
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