Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAU10_04780Transposase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)    
Predicted Functional Partners:
ANP64322.1
Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
ANP64323.1
Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
msrB-2
Methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.912
ANP64249.1
Plasmid stability protein StbA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.864
ANP65601.1
Plasmid stability protein StbA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.859
ANP64279.1
Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.802
ANP64278.1
Conjugal transfer protein TraU; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.795
ANP65538.1
Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.794
ANP65539.1
Conjugal transfer protein TraH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.794
ANP64267.1
Type IV conjugative transfer system protein TraL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.792
Your Current Organism:
Vibrio alginolyticus
NCBI taxonomy Id: 663
Other names: ATCC 17749, Beneckea alginolytica, CAIM 516, CCUG 13445, CCUG 16315, CCUG 4989, CIP 103336, CIP 75.3, DSM 2171, IFO 15630, LMG 4409, LMG:4409, NBRC 15630, NCCB 71013, NCCB 77003, NCTC 12160, Oceanomonas alginolytica, Pseudomonas creosotensis, V. alginolyticus, Vibrio sp. PeIg0901
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.