STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mleN_3Na+/H+ antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)    
Predicted Functional Partners:
ANP67474.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.607
vcrH
CesD/SycD/LcrH family type III secretion system chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.589
vscS
EscS/YscS/HrcS family type III secretion system export apparatus protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.588
vscF
EscF/YscF/HrpA family type III secretion system needle major subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.588
tyeA
SepL/TyeA/HrpJ family type III secretion system gatekeeper; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.585
vscI
EscI/YscI/HrpB family type III secretion system inner rod protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.585
qnr
Fluoroquinolone resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.583
vscL
Type III secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.564
ANP64666.1
RTX toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.554
vxsC
Exoenzyme S synthesis protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.554
Your Current Organism:
Vibrio alginolyticus
NCBI taxonomy Id: 663
Other names: ATCC 17749, Beneckea alginolytica, CAIM 516, CCUG 13445, CCUG 16315, CCUG 4989, CIP 103336, CIP 75.3, DSM 2171, IFO 15630, LMG 4409, LMG:4409, NBRC 15630, NCCB 71013, NCCB 77003, NCTC 12160, Oceanomonas alginolytica, Pseudomonas creosotensis, V. alginolyticus, Vibrio sp. PeIg0901
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