Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ANP64836.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (8361 aa)    
Predicted Functional Partners:
apxIA
Hcalcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.773
ANP66145.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.766
ANP66146.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family.
   
    0.758
hlyA
Calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.752
ANP64167.1
DNA internalization-related competence protein ComEC/Rec2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.739
ANP67435.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.722
ANP65408.1
TIGR03503 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.686
ANP67680.1
Protein CsuD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.674
ANP65913.1
MSHA biogenesis protein MshI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.669
ANP67681.1
Protein CsuC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.668
Your Current Organism:
Vibrio alginolyticus
NCBI taxonomy Id: 663
Other names: ATCC 17749, Beneckea alginolytica, CAIM 516, CCUG 13445, CCUG 16315, CCUG 4989, CIP 103336, CIP 75.3, DSM 2171, IFO 15630, LMG 4409, LMG:4409, NBRC 15630, NCCB 71013, NCCB 77003, NCTC 12160, Oceanomonas alginolytica, Pseudomonas creosotensis, V. alginolyticus, Vibrio sp. PeIg0901
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