STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
canCarbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (222 aa)    
Predicted Functional Partners:
ANP66601.1
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.919
ANP67678.1
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.919
ANP67123.1
Formate transporter FocA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.824
ANP64396.1
Formate transporter FocA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.819
ANP67243.1
Formate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.819
ANP66160.1
Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.757
ANP67373.1
Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.757
ANP65706.1
Sodium-independent anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.640
gpt
Xanthine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
   
    0.607
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.607
Your Current Organism:
Vibrio alginolyticus
NCBI taxonomy Id: 663
Other names: ATCC 17749, Beneckea alginolytica, CAIM 516, CCUG 13445, CCUG 16315, CCUG 4989, CIP 103336, CIP 75.3, DSM 2171, IFO 15630, LMG 4409, LMG:4409, NBRC 15630, NCCB 71013, NCCB 77003, NCTC 12160, Oceanomonas alginolytica, Pseudomonas creosotensis, V. alginolyticus, Vibrio sp. PeIg0901
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