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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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Experiments
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[Homology]
Score
ANP65910.1Pilus (MSHA type) biogenesis protein MshL; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa)    
Predicted Functional Partners:
ANP65912.1
MSHA biogenesis protein MshJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.974
ANP65904.1
MSHA biogenesis protein MshA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.923
ANP65906.1
MSHA biogenesis protein MshG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.921
ANP65907.1
MSHA biogenesis protein MshE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.917
ANP65908.1
MSHA biogenesis protein MshN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.914
ANP65909.1
MSHA biogenesis protein MshM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.914
ANP65913.1
MSHA biogenesis protein MshI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.908
ANP65900.1
MSHA biogenesis protein MshO; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.886
ANP65914.1
RNase E specificity factor CsrD; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.881
ANP65901.1
MSHA biogenesis protein MshD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.879
Your Current Organism:
Vibrio alginolyticus
NCBI taxonomy Id: 663
Other names: ATCC 17749, Beneckea alginolytica, CAIM 516, CCUG 13445, CCUG 16315, CCUG 4989, CIP 103336, CIP 75.3, DSM 2171, IFO 15630, LMG 4409, LMG:4409, NBRC 15630, NCCB 71013, NCCB 77003, NCTC 12160, Oceanomonas alginolytica, Pseudomonas creosotensis, V. alginolyticus, Vibrio sp. PeIg0901
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