STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU25639.1PFAM: fumarate lyase; Fumarase C-like; KEGG: tpd:Teth39_0244 aspartate ammonia-lyase. (460 aa)    
Predicted Functional Partners:
ADU25630.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: rmr:Rmar_1306 L-aspartate oxidase.
 
   
 0.987
argH
KEGG: hmo:HM1_1460 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase.
     
0.909
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.905
ADU28180.1
KEGG: cpy:Cphy_3043 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Adenylosuccinate lyase-like; fumarate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.905
ADU26695.1
KEGG: clj:CLJU_c26720 asparagine synthetase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II.
     
 0.901
pyrB
KEGG: clj:CLJU_c35730 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
  0.900
ADU26559.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
     
 0.849
ADU26344.1
PFAM: Citrate synthase; KEGG: mta:Moth_1122 citrate synthase; Belongs to the citrate synthase family.
     
 0.840
ADU25640.1
Radical SAM domain protein; KEGG: ere:EUBREC_0234 biotin synthase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
   
   0.824
ADU25818.1
PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: ccu:Ccur_07880 2-oxoacid:ferredoxin oxidoreductase, gamma subunit.
   
 0.824
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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