STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU25645.1PFAM: transposase IS605 OrfB; KEGG: cce:Ccel_2298 transposase IS605 OrfB. (512 aa)    
Predicted Functional Partners:
ADU25644.1
KEGG: cce:Ccel_2299 protein serine/threonine phosphatase.
       0.830
ADU25643.1
KEGG: cce:Ccel_2300 putative PAS/PAC sensor protein; PFAM: Fe-S cluster domain protein; SMART: PAS domain containing protein.
       0.810
ADU25666.1
KEGG: dae:Dtox_4216 putative ATPase, transposase-like protein.
    
   0.636
ADU26099.1
KEGG: dae:Dtox_4216 putative ATPase, transposase-like protein.
    
   0.636
ADU25665.1
PFAM: Transposase-like Mu; Integrase catalytic region; KEGG: dae:Dtox_4214 transposase-like Mu.
    
   0.552
ADU26100.1
PFAM: Transposase-like Mu; Integrase catalytic region; KEGG: dae:Dtox_4214 transposase-like Mu.
    
   0.552
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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