STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU25937.1PFAM: Spore cortex biosynthesis protein, YabQ-like; KEGG: gtn:GTNG_0054 spore cortex biosynthesis protein. (178 aa)    
Predicted Functional Partners:
ADU25936.1
KEGG: tmt:Tmath_2056 sporulation protein YabP; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein.
  
  
 0.961
ADU25938.1
PFAM: Septum formation initiator; KEGG: cce:Ccel_3081 septum formation initiator.
  
    0.803
ADU25933.1
Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
  
    0.722
ADU25934.1
KEGG: clj:CLJU_c41660 putative S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.
  
    0.682
ADU25939.1
PFAM: RNA binding S1 domain protein; KEGG: cth:Cthe_2662 RNA binding S1.
       0.595
ADU25932.1
KEGG: cth:Cthe_2656 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase.
  
    0.460
ADU25935.1
Hypothetical protein; KEGG: eba:ebA6316 multi anti extrusion protein MatE.
       0.454
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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