STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU26057.1KEGG: ttu:TERTU_3912 putative type I restriction-modification system specificity subunit; manually curated; PFAM: restriction modification system DNA specificity domain. (214 aa)    
Predicted Functional Partners:
ADU26059.1
PFAM: restriction modification system DNA specificity domain; KEGG: clo:HMPREF0868_0491 type I restriction modification DNA specificity domain protein.
     0.970
ADU26060.1
KEGG: neu:NE0384 restriction modification system, type I.
    
0.902
ADU26061.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
     0.783
ADU26054.1
Site-specific DNA-methyltransferase (adenine-specific); KEGG: shi:Shel_17670 type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA methylase.
 
     0.781
ADU26058.1
PFAM: integrase family protein; KEGG: fma:FMG_1375 putative integrase; Belongs to the 'phage' integrase family.
 
     0.712
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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