STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potASpermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (369 aa)    
Predicted Functional Partners:
ADU26163.1
PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein family 1; KEGG: cbl:CLK_3773 putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein.
 
 0.999
ADU26162.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbe:Cbei_4939 binding-protein-dependent transport systems inner membrane component.
 0.997
ADU27108.1
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.928
ADU25706.1
KEGG: pjd:Pjdr2_1913 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
   
0.900
ADU26133.1
KEGG: clj:CLJU_c25890 putative ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
   
0.888
ADU27718.1
KEGG: cac:CA_C2393 ABC transporter ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
   
0.883
ADU26693.1
PFAM: protein of unknown function DUF214; KEGG: cac:CA_C0320 permease.
 
 
    0.794
ADU27991.1
KEGG: pjd:Pjdr2_2720 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
   
0.792
ADU26139.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_00240 ABC transporter permease protein.
 
  
 0.741
ADU27758.1
KEGG: cbf:CLI_2083 His/Glu/Gln/Arg/opine ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 
 0.732
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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