STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU26343.1KEGG: bts:Btus_3213 stage II sporulation protein D; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D. (343 aa)    
Predicted Functional Partners:
ADU27269.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.887
spoIIAB
Anti-sigma regulatory factor, serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
  
   
 0.799
ADU26750.1
KEGG: sth:STH1862 stage III sporulation protein AA; TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase.
  
  
 0.761
ADU26738.1
KEGG: tit:Thit_0917 sporulation protein YqfD; TIGRFAM: sporulation protein YqfD; PFAM: stage IV sporulation YqfD.
  
  
 0.751
ADU26286.1
Sporulation transcriptional activator Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
   
 0.746
ADU28240.1
Protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; KEGG: amt:Amet_0173 sporulation stage II, protein E; SMART: protein phosphatase 2C domain protein.
 
   
 0.741
ADU27671.1
KEGG: pth:PTH_0185 hypothetical protein; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R.
  
   
 0.732
ADU25936.1
KEGG: tmt:Tmath_2056 sporulation protein YabP; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein.
 
   
 0.716
ADU26285.1
SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: stage IV sporulation protein B; KEGG: cth:Cthe_0813 SpoIVB peptidase; PFAM: peptidase S55 SpoIVB; PDZ/DHR/GLGF domain protein.
  
   
 0.666
ADU27164.1
KEGG: amt:Amet_2872 peptidase U4, sporulation factor SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA; PFAM: peptidase U4 sporulation factor SpoIIGA.
  
   
 0.658
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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