STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU26513.1KEGG: ade:Adeh_0291 AAA ATPase; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase. (531 aa)    
Predicted Functional Partners:
ADU27871.1
KEGG: ngr:NAEGRDRAFT_75750 hypothetical protein.
    
 0.853
ADU26512.1
KEGG: sna:Snas_5283 radical SAM domain-containing protein.
 
     0.833
ADU26514.1
KEGG: cbe:Cbei_3809 hypothetical protein.
       0.768
ADU25593.1
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.676
ADU26511.1
Hypothetical protein; KEGG: cth:Cthe_1907 amino acid adenylation domain-containing protein.
       0.672
ADU27977.1
KEGG: aas:Aasi_1217 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein.
  
 0.663
ADU27979.1
Ankyrin; KEGG: dpe:Dper_GL26712 GL26712 gene product from transcript GL26712-RA; PFAM: Ankyrin; SMART: Ankyrin.
  
 
 0.637
map
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
  
 0.586
ADU27556.1
SMART: Mov34/MPN/PAD-1 family protein; KEGG: csc:Csac_1636 Mov34/MPN/PAD-1 family protein.
   
 0.581
ADU27494.1
PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; KEGG: cce:Ccel_0492 heat shock protein 90.
   
 0.569
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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