STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU26526.1Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sad:SAAV_0936 LysR family transcriptional regulator. (298 aa)    
Predicted Functional Partners:
ADU27752.1
Transcriptional regulator, LysR family; KEGG: bbe:BBR47_45330 transcriptional regulator; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR.
  
     0.774
ADU26124.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bmd:BMD_1434 LysR family transcriptional regulator.
  
     0.773
ADU26733.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: swo:Swol_1191 putative transcriptional regulator.
  
     0.772
ADU26772.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_3466 LysR family transcriptional regulator.
  
     0.772
ADU28076.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_0722 LysR family transcriptional regulator.
  
     0.772
ADU26667.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_1959 LysR family transcriptional regulator.
  
     0.770
ADU27719.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_2143 LysR family transcriptional regulator.
  
     0.761
ADU28192.1
KEGG: hmo:HM1_1037 glutamate synthase [nadph] large chain; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein.
  
  
 0.577
ADU26525.1
2-isopropylmalate synthase; KEGG: sar:SAR0940 hypothetical protein; PFAM: pyruvate carboxyltransferase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
    0.467
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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