STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU26638.1PFAM: protein of unknown function DUF633; KEGG: sez:Sez_1241 putative tRNA-m1A22 methylase. (228 aa)    
Predicted Functional Partners:
ADU26639.1
PFAM: protein of unknown function DUF34; KEGG: rmr:Rmar_1841 protein of unknown function DUF34; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
  
 0.995
ADU26640.1
PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: cdf:CD2592 fibronectin-binding protein.
 
     0.816
ADU27486.1
PFAM: protein of unknown function DUF965; KEGG: drm:Dred_0773 hypothetical protein; Belongs to the UPF0297 family.
  
     0.751
ADU26993.1
Recombination helicase AddA; ATP-dependent DNA helicase.
 
     0.708
ADU26965.1
PFAM: polysaccharide biosynthesis protein; KEGG: aoe:Clos_2639 polysaccharide biosynthesis protein.
  
     0.701
ADU26637.1
PFAM: Domain of unknown function DUF1858; KEGG: cce:Ccel_2420 hypothetical protein.
 
     0.683
ADU27064.1
PFAM: polysaccharide biosynthesis protein; KEGG: cbi:CLJ_B1537 polysaccharide biosynthesis family protein.
  
     0.675
ADU27588.1
Helix-turn-helix protein YlxM/p13 family protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
     0.666
ADU26994.1
Hypothetical protein; ATP-dependent DNA helicase.
 
     0.606
ADU26268.1
KEGG: nth:Nther_1318 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.
  
     0.605
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.