STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU26722.1Dihydropyrimidinase; KEGG: clj:CLJU_c35890 D-hydantoinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase. (459 aa)    
Predicted Functional Partners:
ADU26724.1
TIGRFAM: dihydroorotate dehydrogenase family protein; KEGG: ckr:CKR_2115 dihydropyrimidine dehydrogenase; PFAM: dihydroorotate oxidase.
 
 0.998
pyrB
KEGG: clj:CLJU_c35730 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 
 0.994
ADU26726.1
TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: cbe:Cbei_1944 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein.
 
 
 0.991
carB
KEGG: cth:Cthe_0949 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; Belongs to the CarB family.
 
 0.982
ADU26723.1
Hypothetical protein; KEGG: lrf:LAR_1242 putative oxidoreductase.
 
 
  0.982
carA
KEGG: cth:Cthe_0950 carbamoyl-phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; Belongs to the CarA family.
 
  
 0.979
ADU27842.1
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mrd:Mrad2831_4421 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
  
 
 0.916
pyrR
Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.
  
 
 0.871
ADU26725.1
PFAM: aminotransferase class-III; KEGG: cbe:Cbei_1936 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.825
pyrF
TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: cpy:Cphy_0882 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
  
 0.802
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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