STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU26729.1KEGG: clj:CLJU_c32910 hypothetical protein. (312 aa)    
Predicted Functional Partners:
ADU26730.1
KEGG: clj:CLJU_c32920 hypothetical protein.
 
     0.917
ADU26731.1
PFAM: transcriptional regulator PadR family protein; KEGG: clj:CLJU_c32930 putative transcriptional regulator.
 
     0.898
ADU27698.1
PFAM: PspC domain protein; KEGG: tmt:Tmath_1410 phage shock protein C, PspC.
  
  
 0.498
ADU26826.1
KEGG: clj:CLJU_c35100 hypothetical protein.
  
     0.471
ADU25644.1
KEGG: cce:Ccel_2299 protein serine/threonine phosphatase.
  
     0.468
ADU27739.1
PFAM: transcriptional regulator PadR family protein; KEGG: cdf:CD3209 PadR-family transcriptional regulator.
 
     0.438
ADU28236.1
PFAM: protein of unknown function DUF583; KEGG: btk:BT9727_2634 hypothetical protein.
  
     0.424
ADU26911.1
KEGG: amt:Amet_3459 hypothetical protein.
  
     0.417
ADU27377.1
Glycoside hydrolase family 25; KEGG: lga:LGAS_1488 lyzozyme M1 (1,4-beta-N-acetylmuramidase); PFAM: glycoside hydrolase family 25; Cpl-7 lysozyme domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; Glycoside hydrolase, family 25 subgroup.
   
   0.405
ADU27270.1
PFAM: Peptidoglycan-binding lysin domain; KEGG: cth:Cthe_2402 peptidoglycan-binding LysM.
   
   0.401
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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