STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU26903.1PFAM: protein of unknown function DUF477; KEGG: ctc:CTC00359 hypothetical protein. (267 aa)    
Predicted Functional Partners:
ADU26904.1
PFAM: LemA family protein; KEGG: trq:TRQ2_1831 LemA family protein.
 
    0.962
ADU28005.1
PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: cth:Cthe_1461 FAD dependent oxidoreductase.
 
   0.841
ADU25930.1
KEGG: cth:Cthe_2090 hypothetical protein.
  
  
 0.628
ADU26902.1
PFAM: major facilitator superfamily MFS_1; KEGG: cac:CA_P0049 permease, MDR related.
 
     0.613
ADU27614.1
PFAM: superoxide dismutase copper/zinc binding; KEGG: cno:NT01CX_1771 superoxide dismutase.
    
   0.577
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
    
 
 0.546
ADU28055.1
PFAM: export protein FliQ family 3; KEGG: bgl:bglu_1g00180 flagellar biosynthesis protein FliQ.
    
 
 0.536
ADU28054.1
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
    
 
 0.534
ADU26905.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: rca:Rcas_2661 TrkA domain-containing protein.
       0.531
ADU28072.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
    
   0.525
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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