STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU27009.1KEGG: bth:BT_3689 hypothetical protein. (300 aa)    
Predicted Functional Partners:
ADU27008.1
PFAM: GCN5-related N-acetyltransferase; KEGG: bfs:BF0415 acetyltransferase.
 
     0.957
ADU27113.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bfs:BF1382 putative lactoylglutathione lyase.
  
     0.719
thyX
Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
       0.686
ADU27006.1
KEGG: apv:Apar_0658 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.674
ADU27007.1
DJ-1 family protein; KEGG: bvu:BVU_0473 ThiJ family intracellular protease; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain-containing protein.
       0.673
ADU27010.1
SMART: guanylate kinase/L-type calcium channel region; KEGG: cac:CA_C0298 guanylate kinase.
       0.580
ADU27112.1
KEGG: ctc:CTC00445 putative metal dependent hydrolase.
  
    0.457
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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