STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU27086.1KEGG: cth:Cthe_2098 nucleoside recognition. (175 aa)    
Predicted Functional Partners:
ADU27087.1
PFAM: nucleoside recognition domain protein; KEGG: cce:Ccel_0165 nucleoside recognition domain protein.
  
 0.999
ADU26736.1
PFAM: nucleoside recognition domain protein; KEGG: hmo:HM1_2156 hypothetical protein.
 
  
 0.657
ADU26750.1
KEGG: sth:STH1862 stage III sporulation protein AA; TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase.
  
  
 0.614
ADU26751.1
PFAM: Sporulation stage III protein AB; KEGG: dae:Dtox_2610 stage III sporulation protein SpoAB.
  
  
 0.568
ADU27269.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.567
ADU27088.1
KEGG: bts:Btus_0050 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein.
       0.526
ADU26753.1
KEGG: hmo:HM1_0277 stage III sporulation protein ad, putative.
  
   
 0.525
ADU26699.1
KEGG: ate:Athe_1559 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein.
  
  
 0.495
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
   
 0.482
ADU27671.1
KEGG: pth:PTH_0185 hypothetical protein; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R.
  
   
 0.464
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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