STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU27242.1PFAM: peptidase M14 carboxypeptidase A; KEGG: cpr:CPR_B0001 bacteriocin. (297 aa)    
Predicted Functional Partners:
ADU27243.1
PFAM: ABC-3 protein; KEGG: tde:TDE2562 cation ABC transporter, permease protein, putative.
       0.773
ADU27244.1
KEGG: vpr:Vpar_0239 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.581
ADU27241.1
KEGG: sth:STH609 putative lipase.
       0.493
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.