STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU27286.1KEGG: ckl:CKL_0284 hypothetical protein. (795 aa)    
Predicted Functional Partners:
ADU27287.1
KEGG: ckr:CKR_0239 hypothetical protein.
     0.960
ADU27285.1
PFAM: NLP/P60 protein; KEGG: ckr:CKR_0237 hypothetical protein.
    0.948
ADU27284.1
KEGG: ckl:CKL_0282 hypothetical protein.
 
     0.934
ADU27291.1
KEGG: ckr:CKR_0242 hypothetical protein.
 
   
 0.874
ADU27292.1
KEGG: ckl:CKL_0289 hypothetical protein.
 
     0.860
ADU27293.1
PFAM: TRAG family protein; KEGG: ckr:CKR_0243 hypothetical protein.
 
  
 0.860
ADU27296.1
PFAM: Antirestriction ArdA family protein; KEGG: ckr:CKR_0245 hypothetical protein.
 
    0.855
ADU27294.1
KEGG: ckl:CKL_0291 hypothetical protein.
 
     0.826
ADU27414.1
PFAM: TRAG family protein; KEGG: cdf:CD1115 putative conjugal transfer protein.
 
  
 0.803
ADU27423.1
KEGG: ere:EUBREC_2719 hypothetical protein.
 
   
 0.793
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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