Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADU27430.1SMART: DEAD-like helicase; KEGG: efa:EF2307 hypothetical protein. (2462 aa)    
Predicted Functional Partners:
ADU27419.1
KEGG: ere:EUBREC_3574 hypothetical protein.
 
     0.806
ADU27414.1
PFAM: TRAG family protein; KEGG: cdf:CD1115 putative conjugal transfer protein.
 
    0.779
ADU27391.1
KEGG: efa:EF2305 toprim domain-containing protein.
 
     0.737
ADU27401.1
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: spj:MGAS2096_Spy1142 chromosome partitioning protein ParB; SMART: ParB domain protein nuclease; Belongs to the ParB family.
 
     0.735
ADU27286.1
KEGG: ckl:CKL_0284 hypothetical protein.
 
     0.716
cobB
Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
   
    0.702
ADU27293.1
PFAM: TRAG family protein; KEGG: ckr:CKR_0243 hypothetical protein.
 
    0.691
ADU26052.1
PFAM: Relaxase/mobilization nuclease family protein; KEGG: efa:EF2303 hypothetical protein.
 
     0.680
ADU27427.1
Hypothetical protein; KEGG: cdf:CD1105 putative DNA primase.
 
   
0.666
ADU27437.1
PFAM: Relaxase/mobilization nuclease family protein; KEGG: ere:EUBREC_2727 hypothetical protein.
 
     0.611
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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