STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU27611.1KEGG: clj:CLJU_c17170 putative Fe3+ ABC transporter periplasmic protein. (337 aa)    
Predicted Functional Partners:
ADU27612.1
KEGG: aoe:Clos_0222 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     0.920
ADU27613.1
PFAM: cobalamin synthesis protein P47K; KEGG: aoe:Clos_0221 hypothetical protein.
 
     0.917
ADU26554.1
KEGG: dhd:Dhaf_4261 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    0.809
ADU26555.1
PFAM: cobalamin synthesis protein P47K; KEGG: dhd:Dhaf_4262 cobalamin synthesis protein P47K.
 
     0.786
ADU27610.1
KEGG: gur:Gura_3328 ABC-type Fe3+ transport system periplasmic component-like protein.
 
    
0.736
ADU27736.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH3218 ABC transporter permease protein.
  
  
 0.572
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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