STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU27694.1KEGG: dhd:Dhaf_3661 dipicolinate synthase subunit B; TIGRFAM: dipicolinic acid synthetase, B subunit; PFAM: flavoprotein. (192 aa)    
Predicted Functional Partners:
ADU27693.1
PFAM: Shikimate/quinate 5-dehydrogenase; KEGG: cth:Cthe_0420 dipicolinate synthase subunit A.
 
  
 0.987
ADU27269.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.696
ADU28028.1
PFAM: GerA spore germination protein; KEGG: csc:Csac_2777 GerA spore germination protein.
  
     0.676
ADU28079.1
PFAM: GerA spore germination protein; KEGG: dhd:Dhaf_3282 GerA spore germination protein.
  
     0.669
ADU26736.1
PFAM: nucleoside recognition domain protein; KEGG: hmo:HM1_2156 hypothetical protein.
  
     0.661
ADU27163.1
RNA polymerase, sigma 28 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.657
ADU26285.1
SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: stage IV sporulation protein B; KEGG: cth:Cthe_0813 SpoIVB peptidase; PFAM: peptidase S55 SpoIVB; PDZ/DHR/GLGF domain protein.
  
    0.656
ADU25880.1
KEGG: cth:Cthe_2655 AbrB family transcriptional regulator; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein.
  
     0.641
ADU28251.1
RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.619
ADU27162.1
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.546
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.