STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU27738.1Hypothetical protein; KEGG: hor:Hore_14040 beta-lactamase domain protein. (320 aa)    
Predicted Functional Partners:
ADU27737.1
KEGG: gtn:GTNG_0623 spermidine/putrescine ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
     
 0.782
ADU27736.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH3218 ABC transporter permease protein.
       0.727
ADU27735.1
PFAM: extracellular solute-binding protein family 1; KEGG: ctc:CTC00274 iron(III)-binding periplasmic protein precursor.
       0.490
ADU27734.1
KEGG: tit:Thit_0434 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH.
       0.448
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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