STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU27820.1PFAM: periplasmic binding protein; KEGG: aoe:Clos_0220 periplasmic binding protein. (388 aa)    
Predicted Functional Partners:
ADU27819.1
PFAM: transport system permease protein; KEGG: ckr:CKR_1584 hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.959
ADU26416.1
KEGG: mac:MA1198 iron ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.929
ADU27104.1
KEGG: ckr:CKR_1585 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.929
ADU26417.1
PFAM: transport system permease protein; KEGG: swo:Swol_1676 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.911
ADU26556.1
PFAM: transport system permease protein; KEGG: mta:Moth_1424 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.911
ADU26550.1
PFAM: transport system permease protein; KEGG: ckr:CKR_1584 hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.909
ADU26543.1
PFAM: transport system permease protein; KEGG: ckr:CKR_1584 hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.900
ADU25729.1
KEGG: aoe:Clos_0931 hypothetical protein.
  
 
 0.691
ADU26557.1
KEGG: dsy:DSY3090 hypothetical protein.
 
    0.598
nifH-2
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
     
 0.570
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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