STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU27873.1KEGG: cth:Cthe_0415 spore coat protein CotJB. (87 aa)    
Predicted Functional Partners:
ADU27872.1
PFAM: manganese containing catalase; KEGG: eel:EUBELI_00515 spore coat protein JC.
 
  
 0.989
ADU27874.1
KEGG: tex:Teth514_1215 hypothetical protein.
       0.773
ADU27269.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.750
ADU27164.1
KEGG: amt:Amet_2872 peptidase U4, sporulation factor SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA; PFAM: peptidase U4 sporulation factor SpoIIGA.
  
     0.712
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
     0.684
ADU26757.1
KEGG: dae:Dtox_2604 hypothetical protein.
  
  
 0.653
ADU25865.1
KEGG: cth:Cthe_0123 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein.
  
     0.651
ADU27275.1
KEGG: gym:GYMC10_1698 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
  
    0.626
ADU26738.1
KEGG: tit:Thit_0917 sporulation protein YqfD; TIGRFAM: sporulation protein YqfD; PFAM: stage IV sporulation YqfD.
  
     0.623
ADU26752.1
TIGRFAM: stage III sporulation protein AC; KEGG: amt:Amet_2494 stage III sporulation AC family protein.
  
     0.619
Your Current Organism:
Ethanoligenens harbinense
NCBI taxonomy Id: 663278
Other names: E. harbinense YUAN-3, Ethanoligenens harbinense YUAN-3, Ethanoligenens harbinense str. YUAN-3, Ethanoligenens harbinense strain YUAN-3
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